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MATLAB C-MEX file functions: |
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Allocation functions have been added for C-MEX function |
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writing. These routines are prefixed with "mx" and are |
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available for int and double vector and matrix |
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allocation. There is no "float" capability. |
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This is the file opnml_mex5_allocs.c, routines for allocation of |
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vectors and matricies for use in MATLAB/C-MEX files. It must |
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be complied with strict ANSI-compliance ("gcc -ansi ...", for |
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example, and is coded only for MATLAB5.1 or greater. It should be |
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placed in the OPNML/MATLAB mex src directory, and is included in |
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c-source as: |
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#include "opnml_mex5_allocs.c" |
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These routines are taken from Numerical Recipes in C, |
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Press et. al., and turned into MATLAB-style allocation routines |
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by Brian Blanton (UNC). |
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mxCalloc is used to allocate memory. This function clears |
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the allocated space to (double)0. "Free" functions have NOT been |
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added because MATLAB frees memory allocated within a mex |
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function automatically upon exit if it has been allocated with |
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mxCalloc functions. In fact, freeing memory allocated with mxCalloc |
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within the function seems to cause (atleast me) problems. |
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The MATLAB header file "mex.h" must have been "included" in |
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the c source BEFORE "opnml_mex5_allocs.c". |
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Therefore, the order of "includes" should look something like: |
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#include <stdio.h> |
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#include <math.h> |
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#include "mex.h" |
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#include "opnml_mex5_allocs.c" |
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... |
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If you do not, cmex will NOT complain, but you will get a runtime |
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(in MATLAB) error similar to the following: |
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/lib/dld.sl: Unresolved symbol: mxfree_Dmatrix (code) from |
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/home5/blanton/matlab/mex/contmex.mexhp7 |
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/lib/dld.sl: Unresolved symbol: mxDmatrix (code) from |
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/home5/blanton/matlab/mex/contour_mex.mexhp7 |
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Unable to load mex |
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file: /home5/blanton/matlab/mex/contmex.mexhp7. |
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??? Invalid MEX-file |
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Recall that "matrix.h" is included by "mex.h", so don't do it here. |
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mxCalloc and mxFree WILL BE RESOLVED!! |
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--------------------------------------------------------------------- */ |
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#ifndef _OPNML_ALLOCS_INCLUDED |
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#define _OPNML_ALLOCS_INCLUDED |
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#include <stdio.h> |
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#include <stdlib.h> |
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#include <string.h> |
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static int imaxarg1,imaxarg2; |
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#define IMAX(a,b) (imaxarg1=(a),imaxarg2=(b),(imaxarg1) > (imaxarg2) ? (imaxarg1) : (imaxarg2)) |
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static int iminarg1,iminarg2; |
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#define IMIN(a,b) (iminarg1=(a),iminarg2=(b),(iminarg1) < (iminarg2) ? (iminarg1) : (iminarg2)) |
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static double dmaxarg1,dmaxarg2; |
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#define DMAX(a,b) (dmaxarg1=(a),dmaxarg2=(b),(dmaxarg1) > (dmaxarg2) ? (dmaxarg1) : (dmaxarg2)) |
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static double dminarg1,dminarg2; |
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#define DMIN(a,b) (dminarg1=(a),dminarg2=(b),(dminarg1) < (dminarg2) ? (dminarg1) : (dminarg2)) |
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/* NRC DEFINITION */ |
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#define BUMP 1 |
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#define NR_END 1 |
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#define FREE_ARG char* |
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/* --------------------------------------------------------------------- |
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#### # # ###### # # |
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# # ## ## # # # |
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# ###### # ## # ##### ## |
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# ###### # # # ## |
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# # # # # # # |
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#### # # ###### # # |
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--------------------------------------------------------------------- */ |
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#ifdef mex_h |
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/* ---- C-MEX ALLOCATION FUNCTION PROTOTYPES ------------------------- */ |
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int *mxIvector(int nl,int nh); |
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int **mxImatrix(int nrl,int nrh,int ncl,int nch); |
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double *mxDvector(int nl,int nh); |
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double **mxDmatrix(int nrl,int nrh,int ncl,int nch); |
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/* ---- C-MEX INTEGER VECTOR ALLOCATION ------------------------------ */ |
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int *mxIvector(int nl,int nh) |
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{ |
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int *v; |
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v=(int *)mxCalloc((nh-nl+1),sizeof(int)); |
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if (!v) { |
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puts("allocation failure in mxIvector()"); |
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return(0); |
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} |
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return v-nl; |
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} |
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/* ---- C-MEX INTEGER MATRIX ALLOCATION ------------------------------ */ |
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int **mxImatrix(int nrl,int nrh,int ncl,int nch) |
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{ |
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int i, nrow=nrh-nrl+1,ncol=nch-ncl+1; |
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int **m; |
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/* allocate pointers to rows */ |
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m=(int **) mxCalloc(nrow,sizeof(int*)); |
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if (!m){ |
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puts("row allocation failure in mxImatrix()"); |
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return(0); |
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} |
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m -= nrl; |
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/* allocate rows and set pointers to them */ |
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m[nrl]=(int *) mxCalloc(nrow*ncol,sizeof(int)); |
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if (!m[nrl]) { |
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puts("column allocation failure in mxImatrix()"); |
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return(0); |
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} |
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m[nrl] -= ncl; |
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for(i=nrl+1;i<=nrh;i++) m[i]=m[i-1]+ncol; |
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/* return pointer to array of pointers to rows */ |
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return m; |
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} |
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/* ---- C-MEX DOUBLE VECTOR ALLOCATION ------------------------------- */ |
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double *mxDvector(int nl,int nh) |
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{ |
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double *v; |
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v=(double *) mxCalloc((nh-nl+1),sizeof(double)); |
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if (!v) { |
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puts("allocation failure in mxDvector()"); |
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return(0); |
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} |
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return v-nl; |
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} |
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/* ---- C-MEX DOUBLE MATRIX ALLOCATION ------------------------------- */ |
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double **mxDmatrix(int nrl,int nrh,int ncl,int nch) |
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{ |
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int i, nrow=nrh-nrl+1,ncol=nch-ncl+1; |
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double **m; |
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/* allocate pointers to rows */ |
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m=(double **) mxCalloc(nrow,sizeof(double*)); |
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if (!m) { |
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puts("row allocation failure in mxDmatrix()"); |
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return(0); |
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} |
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m -= nrl; |
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/* allocate rows and set pointers to them */ |
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m[nrl]=(double *) mxCalloc(nrow*ncol,sizeof(double)); |
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if (!m[nrl]) { |
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puts("column allocation failure in mxDmatrix()"); |
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return(0); |
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} |
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m[nrl] -= ncl; |
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for(i=nrl+1;i<=nrh;i++) m[i]=m[i-1]+ncol; |
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/* return pointer to array of pointers to rows */ |
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return m; |
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} |
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/* --------------------------------------------------------------------- |
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#### ##### # # ###### ##### |
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# # # # # # # # |
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# # # ###### ##### # # |
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# # # # # # ##### |
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# # # # # # # # |
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#### # # # ###### # # |
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--------------------------------------------------------------------- */ |
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void opnmlerror(char *error_text,char *routine_name,int line_number,int error_code) |
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{ |
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fprintf(stderr,"%s\n",error_text); |
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fprintf(stderr,"Routine: %s\n",routine_name); |
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fprintf(stderr,"Line Number: %d\n",line_number); |
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fprintf(stderr,"INTERNAL ERROR CODE: %d\n\n",error_code); |
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exit(error_code); |
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} |
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void opnmlerror2(char *error_text,char *routine_name,int error_code) |
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{ |
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int i,line_number=0,nrow; |
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nrow=sizeof(error_text)/sizeof(char *); |
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for (i=0;i<nrow;i++) |
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fprintf(stderr,"%s",error_text[i]); |
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fprintf(stderr,"Routine: %s\n",routine_name); |
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fprintf(stderr,"Line Number: %d\n",line_number); |
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fprintf(stderr,"INTERNAL ERROR CODE: %d\n\n",error_code); |
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exit(error_code); |
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} |
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void nrerror(char error_text[]) |
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/* Numerical Recipes standard error handler */ |
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{ |
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fprintf(stderr,"Numerical Recipes run-time error...\n"); |
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fprintf(stderr,"%s\n",error_text); |
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fprintf(stderr,"...now exiting to system...\n"); |
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exit(1); |
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} |
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int *Ivector(long nl, long nh) |
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/* allocate an int vector with subscript range v[nl..nh] */ |
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{ |
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int *v; |
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v=(int *)malloc((size_t) ((nh-nl+1+BUMP)*sizeof(int))); |
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if (!v) nrerror("allocation failure in ivector()"); |
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return v-nl+BUMP; |
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} |
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void free_Ivector(int *v, long nl, long nh) |
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/* free an int vector allocated with ivector() */ |
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{ |
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free((FREE_ARG) (v+nl-NR_END)); |
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} |
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#endif /* mex_h */ |
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#endif /* _OPNML_ALLOCS_INCLUDED */ |
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