Index: gliderproc/trunk/pelagia_DO_hysteresis_plots.m
===================================================================
--- gliderproc/trunk/pelagia_DO_hysteresis_plots.m (revision 515)
+++ gliderproc/trunk/pelagia_DO_hysteresis_plots.m (revision 516)
@@ -1,132 +1,141 @@
 clear;
 load('GLIDER_DATA_LEVEL1\Pelagia_Deployment1_DO_L1.mat');
-f1 = figure('Name', 'Pelagia Dissolved Oxygen Hysteresis Analysis', 'NumberTitle', 'off');
+figure('Name', 'Pelagia Dissolved Oxygen Hysteresis Analysis', 'NumberTitle', 'off');
 
-sp1 = subplot(3, 4, 1);
-[ax, h1, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
+start = 250174;
+middle = 250290; 
+stop = 250401;
+subplot(3, 4, 1);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
 datetick(ax(1), 'x', 6, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 6, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Pelagia Deployment 1'; 'Depth and O2 Saturation'});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Pelagia Deployment 1'; 'Depth and O2 Saturation'; '\color[rgb]{0 .5 0}Sample Time as Green Bar'});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
+axes(ax(2));
+yl = get(gca, 'YLim');
+line([ptime_ebd_datenum(middle) ptime_ebd_datenum(middle)], [yl(1) yl(2)], 'LineStyle', '-', 'Color', 'green', 'LineWidth', 2);
 
-sp2 = subplot(3, 4, 2);
-start = 250174;
-middle = 250290; 
-stop = 250401;
-[ax, h1, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
+subplot(3, 4, 2);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
 datetick(ax(1), 'x', 15, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 15, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Pelagia Deployment 1'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Pelagia Deployment 1'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
 
-sp3 = subplot(3, 4, 3);
-p1 = plot(o2_sat(start:middle), -depthi(start:middle), '.');
+subplot(3, 4, 3);
+plot(o2_sat(start:middle), -depthi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
-tt = title({'Pelagia Deployment 1'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Depth (m)');
+plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
+title({'Pelagia Deployment 1'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Depth (m)');
 
-sp4 = subplot(3, 4, 4);
-p1 = plot(o2_sat(start:middle), tempi(start:middle), '.');
+subplot(3, 4, 4);
+plot(o2_sat(start:middle), tempi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
-tt = title({'Pelagia Deployment 1'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Temp (Degrees C)');
+plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
+title({'Pelagia Deployment 1'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Temp (Degrees C)');
 
 clear;
 load('GLIDER_DATA_LEVEL1\Pelagia_Deployment2_DO_L1.mat');
 
-sp1 = subplot(3, 4, 5);
-[ax, h1, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
+start = 303249;
+middle = 303491; 
+stop = 303678;
+subplot(3, 4, 5);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
 datetick(ax(1), 'x', 6, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 6, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Pelagia Deployment 2'; 'Depth and O2 Saturation'});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Pelagia Deployment 2'; 'Depth and O2 Saturation'; '\color[rgb]{0 .5 0}Sample Time as Green Bar'});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
+axes(ax(2));
+yl = get(gca, 'YLim');
+line([ptime_ebd_datenum(middle) ptime_ebd_datenum(middle)], [yl(1) yl(2)], 'LineStyle', '-', 'Color', 'green', 'LineWidth', 2);
 
-sp2 = subplot(3, 4, 6);
-start = 303249;
-middle = 303491; 
-stop = 303678;
-[ax, h1, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
+subplot(3, 4, 6);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
 datetick(ax(1), 'x', 15, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 15, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Pelagia Deployment 2'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Pelagia Deployment 2'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
 
-sp3 = subplot(3, 4, 7);
-p1 = plot(o2_sat(start:middle), -depthi(start:middle), '.');
+subplot(3, 4, 7);
+plot(o2_sat(start:middle), -depthi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
-tt = title({'Pelagia Deployment 2'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Depth (m)');
+plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
+title({'Pelagia Deployment 2'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Depth (m)');
 
-sp4 = subplot(3, 4, 8);
-p1 = plot(o2_sat(start:middle), tempi(start:middle), '.');
+subplot(3, 4, 8);
+plot(o2_sat(start:middle), tempi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
-tt = title({'Pelagia Deployment 2'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Temp (Degrees C)');
+plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
+title({'Pelagia Deployment 2'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Temp (Degrees C)');
 
 clear;
 load('GLIDER_DATA_LEVEL1\Pelagia_Deployment3_DO_L1.mat');
 
-sp1 = subplot(3, 4, 9);
-[ax, h1, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
+start = 134879;
+middle = 135082; 
+stop = 135263;
+subplot(3, 4, 9);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
 datetick(ax(1), 'x', 6, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 6, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Pelagia Deployment 3'; 'Depth and O2 Saturation'});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Pelagia Deployment 3'; 'Depth and O2 Saturation'; '\color[rgb]{0 .5 0}Sample Time as Green Bar'});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
+axes(ax(2));
+yl = get(gca, 'YLim');
+line([ptime_ebd_datenum(middle) ptime_ebd_datenum(middle)], [yl(1) yl(2)], 'LineStyle', '-', 'Color', 'green', 'LineWidth', 2);
 
-sp2 = subplot(3, 4, 10);
-start = 134879;
-middle = 135082; 
-stop = 135263;
-[ax, h1, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
+subplot(3, 4, 10);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
 datetick(ax(1), 'x', 15, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 15, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Pelagia Deployment 3'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Pelagia Deployment 3'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
 
-sp3 = subplot(3, 4, 11);
-p1 = plot(o2_sat(start:middle), -depthi(start:middle), '.');
+subplot(3, 4, 11);
+plot(o2_sat(start:middle), -depthi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
-tt = title({'Pelagia Deployment 3'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Depth (m)');
+plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
+title({'Pelagia Deployment 3'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Depth (m)');
 
-sp4 = subplot(3, 4, 12);
-p1 = plot(o2_sat(start:middle), tempi(start:middle), '.');
+subplot(3, 4, 12);
+plot(o2_sat(start:middle), tempi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
-tt = title({'Pelagia Deployment 3'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Temp (Degrees C)');
+plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
+title({'Pelagia Deployment 3'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Temp (Degrees C)');
Index: gliderproc/trunk/ramses_DO_hysteresis_plots.m
===================================================================
--- gliderproc/trunk/ramses_DO_hysteresis_plots.m (revision 515)
+++ gliderproc/trunk/ramses_DO_hysteresis_plots.m (revision 516)
@@ -1,132 +1,141 @@
 clear;
 load('GLIDER_DATA_LEVEL1\Ramses_Deployment1_DO_L1.mat');
-f1 = figure('Name', 'Ramses Dissolved Oxygen Hysteresis Analysis', 'NumberTitle', 'off');
+figure('Name', 'Ramses Dissolved Oxygen Hysteresis Analysis', 'NumberTitle', 'off');
 
-sp1 = subplot(3, 4, 1);
-[ax, h1, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
+start = 279409;
+middle = 279890; 
+stop = 280179;
+subplot(3, 4, 1);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
 datetick(ax(1), 'x', 6, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 6, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Ramses Deployment 1'; 'Depth and O2 Saturation'});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Ramses Deployment 1'; 'Depth and O2 Saturation'; '\color[rgb]{0 .5 0}Sample Time as Green Bar'});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
+axes(ax(2));
+yl = get(gca, 'YLim');
+line([ptime_ebd_datenum(middle) ptime_ebd_datenum(middle)], [yl(1) yl(2)], 'LineStyle', '-', 'Color', 'green', 'LineWidth', 2);
 
-sp2 = subplot(3, 4, 2);
-start = 279409;
-middle = 279890; 
-stop = 280179;
-[ax, h1, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
+subplot(3, 4, 2);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
 datetick(ax(1), 'x', 15, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 15, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Ramses Deployment 1'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Ramses Deployment 1'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
 
-sp3 = subplot(3, 4, 3);
-p1 = plot(o2_sat(start:middle), -depthi(start:middle), '.');
+subplot(3, 4, 3);
+plot(o2_sat(start:middle), -depthi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
-tt = title({'Ramses Deployment 1'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Depth (m)');
+plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
+title({'Ramses Deployment 1'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Depth (m)');
 
-sp4 = subplot(3, 4, 4);
-p1 = plot(o2_sat(start:middle), tempi(start:middle), '.');
+subplot(3, 4, 4);
+plot(o2_sat(start:middle), tempi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
-tt = title({'Ramses Deployment 1'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Temp (Degrees C)');
+plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
+title({'Ramses Deployment 1'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Temp (Degrees C)');
 
 clear;
 load('GLIDER_DATA_LEVEL1\Ramses_Deployment2_DO_L1.mat');
 
-sp1 = subplot(3, 4, 5);
-[ax, h1, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
+start = 96030;
+middle = 96414; 
+stop = 96765;
+subplot(3, 4, 5);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
 datetick(ax(1), 'x', 6, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 6, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Ramses Deployment 2'; 'Depth and O2 Saturation'});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Ramses Deployment 2'; 'Depth and O2 Saturation'; '\color[rgb]{0 .5 0}Sample Time as Green Bar'});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
+axes(ax(2));
+yl = get(gca, 'YLim');
+line([ptime_ebd_datenum(middle) ptime_ebd_datenum(middle)], [yl(1) yl(2)], 'LineStyle', '-', 'Color', 'green', 'LineWidth', 2);
 
-sp2 = subplot(3, 4, 6);
-start = 96030;
-middle = 96414; 
-stop = 96765;
-[ax, h1, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
+subplot(3, 4, 6);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
 datetick(ax(1), 'x', 15, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 15, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Ramses Deployment 2'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Ramses Deployment 2'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
 
-sp3 = subplot(3, 4, 7);
-p1 = plot(o2_sat(start:middle), -depthi(start:middle), '.');
+subplot(3, 4, 7);
+plot(o2_sat(start:middle), -depthi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
-tt = title({'Ramses Deployment 2'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Depth (m)');
+plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
+title({'Ramses Deployment 2'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Depth (m)');
 
-sp4 = subplot(3, 4, 8);
-p1 = plot(o2_sat(start:middle), tempi(start:middle), '.');
+subplot(3, 4, 8);
+plot(o2_sat(start:middle), tempi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
-tt = title({'Ramses Deployment 2'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Temp (Degrees C)');
+plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
+title({'Ramses Deployment 2'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Temp (Degrees C)');
 
 clear;
 load('GLIDER_DATA_LEVEL1\Ramses_Deployment3_DO_L1.mat');
 
-sp1 = subplot(3, 4, 9);
-[ax, h1, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
+start = 66193;
+middle = 66521; 
+stop = 66842;
+subplot(3, 4, 9);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum, -depthi, ptime_ebd_datenum, o2_sat);
 datetick(ax(1), 'x', 6, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 6, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Ramses Deployment 3'; 'Depth and O2 Saturation'});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Ramses Deployment 3'; 'Depth and O2 Saturation'; '\color[rgb]{0 .5 0}Sample Time as Green Bar'});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
+axes(ax(2));
+yl = get(gca, 'YLim');
+line([ptime_ebd_datenum(middle) ptime_ebd_datenum(middle)], [yl(1) yl(2)], 'LineStyle', '-', 'Color', 'green', 'LineWidth', 2);
 
-sp2 = subplot(3, 4, 10);
-start = 66193;
-middle = 66521; 
-stop = 66842;
-[ax, h1, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
+subplot(3, 4, 10);
+[ax, ~, h2] = plotyy(ptime_ebd_datenum(start:stop), -depthi(start:stop), ptime_ebd_datenum(start:stop), o2_sat(start:stop));
 datetick(ax(1), 'x', 15, 'keeplimits', 'keepticks');
 datetick(ax(2), 'x', 15, 'keeplimits', 'keepticks');
 set(h2, 'Color', 'r');
 set(ax(2), 'YColor', 'r');
-tt = title({'Ramses Deployment 3'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
-xl = xlabel('Time');
-yl1 = ylabel(ax(1), 'Depth (m)');
-yl2 = ylabel(ax(2), 'O2 Saturation (%)');
+title({'Ramses Deployment 3'; 'Depth and O2 Saturation'; ['on ', datestr(ptime_ebd_datenum(start), 1)]});
+xlabel('UTC Time');
+ylabel(ax(1), 'Depth (m)');
+ylabel(ax(2), 'O2 Saturation (%)');
 
-sp3 = subplot(3, 4, 11);
-p1 = plot(o2_sat(start:middle), -depthi(start:middle), '.');
+subplot(3, 4, 11);
+plot(o2_sat(start:middle), -depthi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
-tt = title({'Ramses Deployment 3'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Depth (m)');
+plot(o2_sat(middle:stop), -depthi(middle:stop), 'r.');
+title({'Ramses Deployment 3'; 'Depth and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Depth (m)');
 
-sp4 = subplot(3, 4, 12);
-p1 = plot(o2_sat(start:middle), tempi(start:middle), '.');
+subplot(3, 4, 12);
+plot(o2_sat(start:middle), tempi(start:middle), '.');
 hold on;
-p2 = plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
-tt = title({'Ramses Deployment 3'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
-xl = xlabel('O2 Saturation (%)');
-yl = ylabel('Temp (Degrees C)');
+plot(o2_sat(middle:stop), tempi(middle:stop), 'r.');
+title({'Ramses Deployment 3'; 'Temp and O2 Saturation'; '\color{blue}Downcast = Blue \color{black}/ \color{red}Upcast = Red'});
+xlabel('O2 Saturation (%)');
+ylabel('Temp (Degrees C)');